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{"_buckets": {"deposit": "76b18d93-5d97-4fbf-92f7-2c75dd2e5d74"}, "_deposit": {"id": "174", "owners": [], "pid": {"revision_id": 0, "type": "recid", "value": "174"}, "status": "published"}, "_oai": {"id": "oai:meral.edu.mm:recid/174", "sets": ["user-yau"]}, "communities": ["yau"], "control_number": "174", "item_1583103067471": {"attribute_name": "Title", "attribute_value_mlt": [{"subitem_1551255647225": "Genetic Diversity and Population Structure Analysis of some Myanmar Mango (Mangifera spp. L.) Accessions using Simple Sequence Repeat Markers", "subitem_1551255648112": "en_US"}]}, "item_1583103085720": {"attribute_name": "Description", "attribute_value_mlt": [{"interim": "Abstract—Mango (Mangifera indica L.) is a favorite fruit in the world especially in the Indo-Pakistan sub-continent. It is a rich source of vitamins, ß-carotene, minerals, and antioxidants. Mango is known as “the king of fruits” for its taste and flavor. It is native to Southern Asia, especially Burma and eastern India. Since Myanmar is one of the origins of mango. A wide genetic diversity may be found in Myanmar accordingly. Some phenotypic characterizations of Myanmar mangoes have been done but the information of genetic assessments is still limited. Therefore, the present study intended to make genetic assessments of some Myanmar mango accessions collected from different\r geographical regions using Simple Sequence\r Repeat markers (SSR). This study was\r carried out at the laboratory of the\r Department of Horticulture, Yezin\r Agricultural University (YAU). Fully grown\r mango leaf samples were used to extract total\r genomic DNA. The DNAs were extracted by\r modified CTAB method and checked purity\r and concentration with nano\r spectrophotometer. The sample DNAs were\r amplified using five pairs of SSR primers.\r One SSR (MSSR80) revealed as\r monomorphic marker among tested 94\r mango accessions. The data were analysed\r using Structure 2.2 and Phylip software\r package. The phylogenetic tree was\r constructed by MEGA6 software program.\r According to population structure analysis,\r 94 mango accessions could be distinguished\r into three populations though four accessions\r were assessed as admixtures. Four\r accessions; Parr Phyu Thee (Kinda), Pann\r Bin Ga Lar (Kalar Gyi), Pyo Ta Ngon\r (Kinda) and Yin Kwae (Kinda) stood as\r admixtures. No correlation between the\r geographical distribution and population\r structure of mango was found. One accession,\r Sein Ta Lone (Pan Swae) stood as an\r outstanding accession in phylogenetic tree\r constructed by Phylip program although it\r was grouped together with Shwe Myo Sae,\r Ma Chit Su and others in population\r structure analysis. It was hard to say discrete\r population. Almost all accessions of a\r population possessed some alleles from other\r populations. It implied that cross pollination\r nature plays an important role in mango gene\r pool. Accordingly, wider genetic diversity\r would be expected among mango population\r in Myanmar."}]}, "item_1583103108160": {"attribute_name": "Keywords", "attribute_value_mlt": [{"interim": "Genetic Diversity"}, {"interim": " Population Structure"}, {"interim": " Myanmar Mango"}, {"interim": " SSR"}]}, "item_1583103120197": {"attribute_name": "Files", "attribute_type": "file", "attribute_value_mlt": [{"accessrole": "open_access", "date": [{"dateType": "Available", "dateValue": "2020-05-05"}], "displaytype": "preview", "download_preview_message": "", "file_order": 0, "filename": "Moe et al Mango Diversity.pdf", "filesize": [{"value": "670 Kb"}], "format": "application/pdf", "future_date_message": "", "is_thumbnail": false, "licensetype": "license_free", "mimetype": "application/pdf", "size": 670000.0, "url": {"url": "https://meral.edu.mm/record/174/files/Moe et al Mango Diversity.pdf"}, "version_id": "93d8acfb-e44b-4715-bb2b-69636b4a9eec"}]}, "item_1583103131163": {"attribute_name": "Journal articles", "attribute_value_mlt": [{"subitem_journal_title": "Myanmar Universities\u0027 Research Conference, 2019", "subitem_volume": "Proceeding,;17-24"}]}, "item_1583103147082": {"attribute_name": "Conference papaers", "attribute_value_mlt": [{}]}, "item_1583103211336": {"attribute_name": "Books/reports/chapters", "attribute_value_mlt": [{}]}, "item_1583103233624": {"attribute_name": "Thesis/dissertations", "attribute_value_mlt": [{"subitem_supervisor(s)": []}]}, "item_1583105942107": {"attribute_name": "Authors", "attribute_value_mlt": [{"subitem_authors": [{"subitem_authors_fullname": "Moe Kyaw Thu, Win Naing, Han Phyo Aung and Khin Thida Myint"}]}]}, "item_1583108359239": {"attribute_name": "Upload type", "attribute_value_mlt": [{"interim": "Publication"}]}, "item_1583108428133": {"attribute_name": "Publication type", "attribute_value_mlt": [{"interim": "Journal article"}]}, "item_1583159729339": {"attribute_name": "Publication date", "attribute_value": "2019"}, "item_1583159847033": {"attribute_name": "Identifier", "attribute_value": "https://yauor-yau.archive.knowledgearc.net/handle/123456789/297"}, "item_title": "Genetic Diversity and Population Structure Analysis of some Myanmar Mango (Mangifera spp. L.) Accessions using Simple Sequence Repeat Markers", "item_type_id": "21", "owner": "1", "path": ["1582969313627"], "permalink_uri": "http://hdl.handle.net/20.500.12678/0000000174", "pubdate": {"attribute_name": "Deposited date", "attribute_value": "2020-03-05"}, "publish_date": "2020-03-05", "publish_status": "0", "recid": "174", "relation": {}, "relation_version_is_last": true, "title": ["Genetic Diversity and Population Structure Analysis of some Myanmar Mango (Mangifera spp. L.) Accessions using Simple Sequence Repeat Markers"], "weko_shared_id": -1}

Genetic Diversity and Population Structure Analysis of some Myanmar Mango (Mangifera spp. L.) Accessions using Simple Sequence Repeat Markers

http://hdl.handle.net/20.500.12678/0000000174
21c10ced-541e-4bb2-9f3c-45bb1af62413
76b18d93-5d97-4fbf-92f7-2c75dd2e5d74
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Moe Moe et al Mango Diversity.pdf (670 Kb)
Publication type
Journal article
Upload type
Publication
Title
Title Genetic Diversity and Population Structure Analysis of some Myanmar Mango (Mangifera spp. L.) Accessions using Simple Sequence Repeat Markers
Language en_US
Publication date 2019
Authors
Moe Kyaw Thu, Win Naing, Han Phyo Aung and Khin Thida Myint
Description
Abstract—Mango (Mangifera indica L.) is a favorite fruit in the world especially in the Indo-Pakistan sub-continent. It is a rich source of vitamins, ß-carotene, minerals, and antioxidants. Mango is known as “the king of fruits” for its taste and flavor. It is native to Southern Asia, especially Burma and eastern India. Since Myanmar is one of the origins of mango. A wide genetic diversity may be found in Myanmar accordingly. Some phenotypic characterizations of Myanmar mangoes have been done but the information of genetic assessments is still limited. Therefore, the present study intended to make genetic assessments of some Myanmar mango accessions collected from different
geographical regions using Simple Sequence
Repeat markers (SSR). This study was
carried out at the laboratory of the
Department of Horticulture, Yezin
Agricultural University (YAU). Fully grown
mango leaf samples were used to extract total
genomic DNA. The DNAs were extracted by
modified CTAB method and checked purity
and concentration with nano
spectrophotometer. The sample DNAs were
amplified using five pairs of SSR primers.
One SSR (MSSR80) revealed as
monomorphic marker among tested 94
mango accessions. The data were analysed
using Structure 2.2 and Phylip software
package. The phylogenetic tree was
constructed by MEGA6 software program.
According to population structure analysis,
94 mango accessions could be distinguished
into three populations though four accessions
were assessed as admixtures. Four
accessions; Parr Phyu Thee (Kinda), Pann
Bin Ga Lar (Kalar Gyi), Pyo Ta Ngon
(Kinda) and Yin Kwae (Kinda) stood as
admixtures. No correlation between the
geographical distribution and population
structure of mango was found. One accession,
Sein Ta Lone (Pan Swae) stood as an
outstanding accession in phylogenetic tree
constructed by Phylip program although it
was grouped together with Shwe Myo Sae,
Ma Chit Su and others in population
structure analysis. It was hard to say discrete
population. Almost all accessions of a
population possessed some alleles from other
populations. It implied that cross pollination
nature plays an important role in mango gene
pool. Accordingly, wider genetic diversity
would be expected among mango population
in Myanmar.
Keywords
Genetic Diversity, Population Structure, Myanmar Mango, SSR
Identifier https://yauor-yau.archive.knowledgearc.net/handle/123456789/297
Journal articles
Myanmar Universities' Research Conference, 2019
Proceeding,;17-24
Conference papaers
Books/reports/chapters
Thesis/dissertations
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